mapgd  0.4
A program for the Maximum-likelihood analysis of population genomic data.
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File List
Here is a list of all documented files with brief descriptions:
[detail level 123]
\-mapgd_0.4
 o-commands
 |o*compare-individial.h
 |o*compare-individual.h
 |o*compare-pooled.h
 |o*estimate-auto-zygosity.h
 |o*estimate_fst.h
 |o*estimate_individual.h
 |o*estimate_pooled.h
 |o*fastview.h
 |o*filter.h
 |o*filter_genotype.h
 |o*filter_pool.h
 |o*interface.h
 |o*linkage_disequilibrium.h
 |o*make_vcf.h
 |o*make_vcf2.h
 |o*map2genotype.h
 |o*mapgd_help.h
 |o*proview.h
 |o*read_bed.h
 |o*read_pheno.h
 |o*read_vcf.h
 |o*relatedness.h
 |o*relatedness_test.h
 |o*reml.h
 |o*sam2idx.h
 |o*simulate.h
 |\*test_keys.h
 o-data_conversion
 |o*bcf2pro.h
 |o*bcf2pro_file.h
 |o*bed_file.h
 |o*external-data.h
 |o*external-file.h
 |o*plink_pheno.h
 |\*vcf_file.h
 o-data_types
 |o*allele.h
 |o*data.h
 |o*file_index.h
 |o*key.h
 |o*linkage_data.h
 |o*locus.h
 |o*log.h
 |o*pedigree.h
 |o*phenotype.h
 |o*pooled_data.h
 |o*population.h
 |o*relatedness_data.h
 |o*sample_gof.h
 |o*sample_name.h
 |\*state.h
 o-gzstream
 |\*gzstream.h
 o-io
 |\*map_file.h
 o-math_functions
 |o*binomial.h
 |o*likelihood.h
 |o*lnmultinomial.h
 |\*models.h
 o-mpi
 |\*mpi_relatedness.h
 o-python_api
 |\*mapgdapi.h
 o-raw
 |o*base.h
 |o*constants.h
 |o*genotype.h
 |o*genotype_pair.h
 |o*pedigree_record.h
 |o*quartet.h
 |o*raw.h
 |\*region.h
 o-sql
 |o*db_api.h
 |o*readsql.h
 |\*writesql.h
 o-stream_tools
 |o*stream_tools.h
 |\*tmp_buffer.h
 o-system
 |\*system.h
 o*commands.h
 o*conversion.h
 o*datatypes.h
 o*error_codes.h
 o*individual_likelihood.h
 o*newton-method-ld.h
 o*newton-method-rel.h
 o*newton-method-theta.h
 o*pooled_likelihood.h
 \*typedef.h
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