#include <phenotype.h>

Inheritance diagram for Phenotype:

Collaboration diagram for Phenotype:

Public Member Functions
	Phenotype (const std::vector< std::string > &)

	Phenotype (const size_t &)

std::string	header (void) const
	The header line of plain text files.

size_t	size (void) const
	Size in bytes for binary read/write.

void	add_sample (const uint32_t &, const real_t *)

const std::string	get_file_name (void) const

const std::string	get_table_name (void) const

const bool	get_binary () const

Public Member Functions inherited from Data
void	read_binary (std::istream &str)

void	write_binary (std::ostream &str) const

	Data (std::vector< std::string > &)

virtual const bool	indexed () const

virtual const std::string	sql_header (void) const
	Return the names of the columns, along with variable type.

virtual const std::string	sql_column_names (void) const
	Return the names of the columns.

virtual const std::string	sql_values (void) const
	Return the values to be placed in columns.

virtual void	sql_read (std::istream &)
	Reads the values...

Data Fields
char	delim
	the delimiter used when reading/writing the class in text mode.

std::vector< std::string >	sample_name

std::vector< std::string >	trait

std::vector< std::vector < real_t > >	value

Static Public Attributes
static const std::string	file_name =".phe"
	zeros values and sets names to empty. More...

static const std::string	table_name ="PHENOTYPE"
	Destination table in Db.

static const bool	binary =false

Static Public Attributes inherited from Data
static const std::string	file_name =".txt"
	The read function must be defined in the child class. More...

static const std::string	table_name ="NONE"
	The read function must be defined in the child class. More...

Static Private Member Functions
static Data *	create (const std::vector< std::string > &Columns)

Static Private Attributes
static const Registration	registered =Registration(Phenotype::table_name, Phenotype::create)

Additional Inherited Members
Static Public Member Functions inherited from Data
static Data *	new_from_str (const std::string &, const std::vector< std::string > &)
	Constructs an instance of the class Registered w/ string.

Detailed Description

Field Documentation

const std::string Phenotype::file_name =".phe"

static

zeros values and sets names to empty.

zeros values, but doesn't set names to empty. The dafualt extention for files.

The documentation for this class was generated from the following files: